generate_raw_data_reads_const_db.sh 1.1 KB

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  1. #!/bin/bash
  2. # Usage: ./generate_raw_data_reads_const_db.sh [niters]
  3. nitrs=1
  4. if [ "$1" != "" ]; then
  5. nitrs="$1"
  6. fi
  7. cd ..
  8. mkdir -p prac/data
  9. for itr in $(seq 1 $nitrs); do
  10. now=`date`; echo "$now: Running 16 reads ..."
  11. ./docker/run-experiment 20 16 >> "prac/data/log_20_16_reads.out"
  12. now=`date`; echo "$now: Running 32 reads ..."
  13. ./docker/run-experiment 20 32 >> "prac/data/log_20_32_reads.out"
  14. now=`date`; echo "$now: Running 64 reads ..."
  15. ./docker/run-experiment 20 64 >> "prac/data/log_20_64_reads.out"
  16. now=`date`; echo "$now: Running 128 reads ..."
  17. ./docker/run-experiment 20 128 >> "prac/data/log_20_128_reads.out"
  18. now=`date`; echo "$now: Running 256 reads ..."
  19. ./docker/run-experiment 20 256 >> "prac/data/log_20_256_reads.out"
  20. now=`date`; echo "$now: Running 512 reads ..."
  21. ./docker/run-experiment 20 512 >> "prac/data/log_20_512_reads.out"
  22. now=`date`; echo "$now: Running 1024 reads ..."
  23. ./docker/run-experiment 20 1024 >> "prac/data/log_20_1024_reads.out"
  24. now=`date`; echo "$now: Running 2048 reads ..."
  25. ./docker/run-experiment 20 2048 >> "prac/data/log_20_2048_reads.out"
  26. done